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A Career in ...
Bioinformatics


Profile
Name: David Studholme

Age: 31

Present occupation:
Computer Biologist in the Informatics Department of the Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK.

Previous employment:
I have spent several years since my PhD doing laboratory-based resarch into genetic regulation in bacteria.

Education:
PhD, Imperial College, London,
Metabolic Engineering of Thermophilic Bacteria for Enhanced Bio-Ethanol Production

BSc, Southampton University, Applied Biology

Recommended links:
The Wellcome Trust Sanger Centre
European Bioinformatics Institute
Bioinformatics Organisation
UK Human Genome Mapping Project

What is bioinformatics?
In the broad sense, it is the application of computer technology to biological problems. Recently, one of the high profile areas has been management and analysis of vast quantities of data from genome sequencing projects and presenting the data in a way that is useful and accessible to biologists.

Why did you choose bioinformatics for your career?
I always enjoyed tinkering with computers as well as biology. In the last few years I was using bioinformatics in my microbiology research and found that this was the most enjoyable and successful aspect of my work. So it seemed like the natural next step as well as an exciting new challenge to move into this area. It also did not escape my notice that the opportunities for career development looked a lot rosier in bioinformatics.

Do you work in a narrowly focused or multidisciplinary team?
Many of the team come from a biological research background, along with several computer scientists. The bioinformaticians here use a large and complex computer infrastructure and so are very dependent on IT specialists in systems support and web developers. We collaborate closely with colleagues at the European Bioinformatics Institute (EBI), also at Hinxton, which adds an extra dimension.

The Sanger Institute is world famous - does this make it an exciting place to work?
Yes it is - there is quite a buzz when a new genome project is completed or a Nobel prize is awarded! Being surrounded by some of the best biologists and bioinformaticians is a great environment for learning a lot quickly. It is also very rewarding to contribute to resources such as the Pfam and InterPro databases, used via the world wide web by thousands of scientists worldwide.


What qualities make a successful Bioinformaticist?
Enjoyment of problem-solving is very helpful. Obviously an enthusiasm for computers as well as biology is important and a bioinformatician must be open to learning about new techniques and technologies. Ability to work as part of a team is paramount as many of the bioinfomatics websites and databases are the product of large numbers of individuals with diverse expertise and experience working interdependently.


Are there many career opportunities in this area of research?
This is a fast-growing area. Institutes like the Sanger and the EBI seem to be continually expanding, new bioinformatics centers are springing up in the Universities, and there seems to be plenty of demand for suitable candidates in industry, although perhaps more so in the US than in Europe. Just as important as actually doing research are the many opportunities in curating, developing and maintaining databases, applications and webservers that provide tools and hypotheses for research.

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